Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn3Q9DCB1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn3Q9DCB1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Mir1668-201ENSMUST00000184114 107 ntBASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn3Q9DCB1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms