Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chmp4bQ9D8B3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp4bQ9D8B3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Mir5126-201ENSMUST00000175513 77 ntBASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Gm4899-201ENSMUST00000178708 719 ntBASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Gm18246-201ENSMUST00000221023 728 ntBASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp4bQ9D8B3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp4bQ9D8B3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 212.7 ms