Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Gm11745-201ENSMUST00000121669 448 ntBASIC19.76■□□□□ 0.75
U2af1Q9D883 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.76■□□□□ 0.75
U2af1Q9D883 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
U2af1Q9D883 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1Q9D883 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
U2af1Q9D883 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
U2af1Q9D883 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.75■□□□□ 0.75
U2af1Q9D883 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
U2af1Q9D883 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Gm16026-204ENSMUST00000162652 683 ntBASIC19.75■□□□□ 0.75
U2af1Q9D883 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
U2af1Q9D883 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.75■□□□□ 0.75
U2af1Q9D883 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.75■□□□□ 0.75
U2af1Q9D883 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2af1Q9D883 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
U2af1Q9D883 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
U2af1Q9D883 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.74■□□□□ 0.75
U2af1Q9D883 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
U2af1Q9D883 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Gm13365-201ENSMUST00000121188 973 ntBASIC19.74■□□□□ 0.75
U2af1Q9D883 Mir1895-201ENSMUST00000122615 79 ntBASIC19.74■□□□□ 0.75
U2af1Q9D883 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.74■□□□□ 0.75
U2af1Q9D883 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2af1Q9D883 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
U2af1Q9D883 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.73■□□□□ 0.75
U2af1Q9D883 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Gm26308-201ENSMUST00000157768 69 ntBASIC19.73■□□□□ 0.75
U2af1Q9D883 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.73■□□□□ 0.75
U2af1Q9D883 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.73■□□□□ 0.75
U2af1Q9D883 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.73■□□□□ 0.75
U2af1Q9D883 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
U2af1Q9D883 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.73■□□□□ 0.75
U2af1Q9D883 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms