Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1dQ9D4V4 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.84■□□□□ 0.45
Taf1dQ9D4V4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1dQ9D4V4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.83■□□□□ 0.45
Taf1dQ9D4V4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Taf1dQ9D4V4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Taf1dQ9D4V4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Taf1dQ9D4V4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Taf1dQ9D4V4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Snora78-201ENSMUST00000158630 128 ntBASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Gm18827-201ENSMUST00000188341 790 ntBASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Taf1dQ9D4V4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Gm13216-201ENSMUST00000117145 591 ntBASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Gm45784-201ENSMUST00000188360 142 ntBASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 AA619741-201ENSMUST00000195095 646 ntBASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Mir125a-201ENSMUST00000083545 68 ntBASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Taf1dQ9D4V4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Taf1dQ9D4V4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Mir1894-201ENSMUST00000122802 81 ntBASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Gm43179-201ENSMUST00000198797 275 ntBASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Taf1dQ9D4V4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Gm12585-201ENSMUST00000117307 290 ntBASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.79■□□□□ 0.44
Taf1dQ9D4V4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms