Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tmem88Q9D0N8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem88Q9D0N8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem88Q9D0N8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms