Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Gm18032-201ENSMUST00000222541 538 ntBASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.16□□□□□ -0.14
Chaf1bQ9D0N7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Gm10013-201ENSMUST00000106074 672 ntBASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Gm6433-201ENSMUST00000118634 875 ntBASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Gm9013-201ENSMUST00000132939 882 ntBASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chaf1bQ9D0N7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms