Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim13Q9CYB0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Gm14722-201ENSMUST00000118943 689 ntBASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Gm9013-201ENSMUST00000132939 882 ntBASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim13Q9CYB0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms