Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Gm8655-201ENSMUST00000221159 852 ntBASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssu72Q9CY97 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Olfr129-201ENSMUST00000122318 993 ntBASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.92□□□□□ -0.02
Ssu72Q9CY97 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms