Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx28Q9CWT6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ddx28Q9CWT6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx28Q9CWT6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms