Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smc3Q9CW03 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc3Q9CW03 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.71■□□□□ 0.43
Smc3Q9CW03 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.7■□□□□ 0.42
Smc3Q9CW03 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smc3Q9CW03 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.7■□□□□ 0.42
Smc3Q9CW03 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc3Q9CW03 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.69■□□□□ 0.42
Smc3Q9CW03 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Gm10499-201ENSMUST00000174094 934 ntBASIC17.69■□□□□ 0.42
Smc3Q9CW03 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc3Q9CW03 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.68■□□□□ 0.42
Smc3Q9CW03 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Gm11780-201ENSMUST00000136880 516 ntBASIC17.68■□□□□ 0.42
Smc3Q9CW03 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.68■□□□□ 0.42
Smc3Q9CW03 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smc3Q9CW03 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms