Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Atxn3Q9CVD2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn3Q9CVD2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn3Q9CVD2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn3Q9CVD2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Gm14822-201ENSMUST00000122247 291 ntBASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn3Q9CVD2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms