Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Gm9899-201ENSMUST00000065519 555 ntBASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Mir1938-201ENSMUST00000158746 100 ntBASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Dupd1-202ENSMUST00000224735 548 ntBASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldnd1Q9CQX5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Gm11918-201ENSMUST00000121660 179 ntBASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Gm6266-201ENSMUST00000203844 806 ntBASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Gm16476-201ENSMUST00000221544 139 ntBASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldnd1Q9CQX5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms