Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Gm29541-201ENSMUST00000191351 678 ntBASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Gm15693-201ENSMUST00000120470 637 ntBASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prpf8Q99PV0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Prpf8Q99PV0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prpf8Q99PV0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Prpf8Q99PV0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Gm13823-201ENSMUST00000119930 345 ntBASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 App-207ENSMUST00000227737 2827 ntBASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Gm13216-201ENSMUST00000117145 591 ntBASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Gm18737-201ENSMUST00000173594 937 ntBASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Gm27306-201ENSMUST00000183970 107 ntBASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.33□□□□□ -0.44
Prpf8Q99PV0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prpf8Q99PV0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms