Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim8Q99PJ2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Gm7506-201ENSMUST00000207758 815 ntBASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Gm9172-201ENSMUST00000212092 954 ntBASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Gm18622-201ENSMUST00000219361 595 ntBASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Trim8Q99PJ2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.76□□□□□ -0.05
Trim8Q99PJ2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim8Q99PJ2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.75□□□□□ -0.05
Trim8Q99PJ2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Gm27742-201ENSMUST00000184667 60 ntBASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Gm19164-201ENSMUST00000210667 640 ntBASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim8Q99PJ2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Gm14722-201ENSMUST00000118943 689 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms