Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh15Q99PJ1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh15Q99PJ1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh15Q99PJ1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh15Q99PJ1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh15Q99PJ1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Gm45841-201ENSMUST00000207700 164 ntBASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh15Q99PJ1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Gm17795-201ENSMUST00000214505 757 ntBASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh15Q99PJ1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh15Q99PJ1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Gm43179-201ENSMUST00000198797 275 ntBASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.71■□□□□ 0.27
Pcdh15Q99PJ1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh15Q99PJ1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh15Q99PJ1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh15Q99PJ1 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms