Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.12■□□□□ 0.01
Cdh23Q99PF4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.12■□□□□ 0.01
Cdh23Q99PF4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh23Q99PF4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 AA619741-201ENSMUST00000195095 646 ntBASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh23Q99PF4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Gm45453-201ENSMUST00000211758 853 ntBASIC15.09■□□□□ 0.01
Cdh23Q99PF4 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.09■□□□□ 0.01
Cdh23Q99PF4 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Gm5356-201ENSMUST00000093326 615 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms