Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trem2Q99NH8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.3■□□□□ 0.04
Trem2Q99NH8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm12008-201ENSMUST00000117791 755 ntBASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.29■□□□□ 0.04
Trem2Q99NH8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm23547-201ENSMUST00000158210 271 ntBASIC15.29■□□□□ 0.04
Trem2Q99NH8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.29■□□□□ 0.04
Trem2Q99NH8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.29■□□□□ 0.04
Trem2Q99NH8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trem2Q99NH8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Gm18195-201ENSMUST00000207604 706 ntBASIC15.28■□□□□ 0.04
Trem2Q99NH8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Trem2Q99NH8 Carlr-201ENSMUST00000181515 2574 ntBASIC15.28■□□□□ 0.04
Trem2Q99NH8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.27■□□□□ 0.04
Trem2Q99NH8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.27■□□□□ 0.04
Trem2Q99NH8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.27■□□□□ 0.04
Trem2Q99NH8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Gm27300-201ENSMUST00000184085 97 ntBASIC15.27■□□□□ 0.04
Trem2Q99NH8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.27■□□□□ 0.04
Trem2Q99NH8 Gm27628-201ENSMUST00000184911 107 ntBASIC15.27■□□□□ 0.04
Trem2Q99NH8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trem2Q99NH8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trem2Q99NH8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trem2Q99NH8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trem2Q99NH8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trem2Q99NH8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trem2Q99NH8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms