Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Gm11764-201ENSMUST00000120221 623 ntBASIC14.66□□□□□ -0.06
Msh4Q99MT2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Gm37153-201ENSMUST00000193637 231 ntBASIC14.66□□□□□ -0.06
Msh4Q99MT2 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.66□□□□□ -0.06
Msh4Q99MT2 Psmb5-202ENSMUST00000227257 622 ntBASIC14.66□□□□□ -0.06
Msh4Q99MT2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.66□□□□□ -0.06
Msh4Q99MT2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.66□□□□□ -0.06
Msh4Q99MT2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Msh4Q99MT2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.65□□□□□ -0.06
Msh4Q99MT2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.65□□□□□ -0.06
Msh4Q99MT2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh4Q99MT2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Msh4Q99MT2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.64□□□□□ -0.07
Msh4Q99MT2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.64□□□□□ -0.07
Msh4Q99MT2 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.64□□□□□ -0.07
Msh4Q99MT2 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.64□□□□□ -0.07
Msh4Q99MT2 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.64□□□□□ -0.07
Msh4Q99MT2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms