Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Gm43703-201ENSMUST00000200523 763 ntBASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm15236-201ENSMUST00000117309 379 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm12176-201ENSMUST00000121420 875 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm27533-201ENSMUST00000183800 152 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm18056-201ENSMUST00000207670 568 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm18061-201ENSMUST00000208350 562 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm18063-201ENSMUST00000208529 568 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gm18052-201ENSMUST00000208750 559 ntBASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col25a1Q99MQ5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm18737-201ENSMUST00000173594 937 ntBASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
Col25a1Q99MQ5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Mir5132-201ENSMUST00000175166 71 ntBASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Gm38241-201ENSMUST00000192641 898 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms