Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.55■□□□□ 0.08
SncaipQ99ME3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.55■□□□□ 0.08
SncaipQ99ME3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.55■□□□□ 0.08
SncaipQ99ME3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.55■□□□□ 0.08
SncaipQ99ME3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.55■□□□□ 0.08
SncaipQ99ME3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SncaipQ99ME3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.54■□□□□ 0.08
SncaipQ99ME3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.54■□□□□ 0.08
SncaipQ99ME3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SncaipQ99ME3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Gm13597-201ENSMUST00000121239 375 ntBASIC15.53■□□□□ 0.08
SncaipQ99ME3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.53■□□□□ 0.08
SncaipQ99ME3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.53■□□□□ 0.08
SncaipQ99ME3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SncaipQ99ME3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.52■□□□□ 0.08
SncaipQ99ME3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Gm1401-201ENSMUST00000122048 772 ntBASIC15.52■□□□□ 0.08
SncaipQ99ME3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.52■□□□□ 0.08
SncaipQ99ME3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.52■□□□□ 0.08
SncaipQ99ME3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SncaipQ99ME3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms