Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1b1Q99LU0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Gm15173-201ENSMUST00000122049 433 ntBASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Gm6296-201ENSMUST00000222599 943 ntBASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1b1Q99LU0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms