Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Gm15653-201ENSMUST00000119247 907 ntBASIC15.79■□□□□ 0.12
Clp1Q99LI9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Celf4-206ENSMUST00000224553 1729 ntBASIC15.79■□□□□ 0.12
Clp1Q99LI9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clp1Q99LI9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.79■□□□□ 0.12
Clp1Q99LI9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Gm43703-201ENSMUST00000200523 763 ntBASIC15.78■□□□□ 0.12
Clp1Q99LI9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.78■□□□□ 0.12
Clp1Q99LI9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clp1Q99LI9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gm4875-201ENSMUST00000118257 786 ntBASIC15.77■□□□□ 0.12
Clp1Q99LI9 Mir1897-201ENSMUST00000122581 272 ntBASIC15.77■□□□□ 0.12
Clp1Q99LI9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.77■□□□□ 0.12
Clp1Q99LI9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.77■□□□□ 0.12
Clp1Q99LI9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.77■□□□□ 0.12
Clp1Q99LI9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gm43433-201ENSMUST00000196573 481 ntBASIC15.77■□□□□ 0.12
Clp1Q99LI9 Gm16476-201ENSMUST00000221544 139 ntBASIC15.77■□□□□ 0.12
Clp1Q99LI9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clp1Q99LI9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clp1Q99LI9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.77■□□□□ 0.11
Clp1Q99LI9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clp1Q99LI9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Clp1Q99LI9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clp1Q99LI9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clp1Q99LI9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clp1Q99LI9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.76■□□□□ 0.11
Clp1Q99LI9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm22189-201ENSMUST00000103822 86 ntBASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms