Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.71□□□□□ -0.21
Lims1Q99JW4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.71□□□□□ -0.21
Lims1Q99JW4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lims1Q99JW4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lims1Q99JW4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Lims1Q99JW4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Lims1Q99JW4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Gm11780-201ENSMUST00000136880 516 ntBASIC13.7□□□□□ -0.22
Lims1Q99JW4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.7□□□□□ -0.22
Lims1Q99JW4 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.7□□□□□ -0.22
Lims1Q99JW4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.7□□□□□ -0.22
Lims1Q99JW4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.7□□□□□ -0.22
Lims1Q99JW4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lims1Q99JW4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm28033-201ENSMUST00000184224 96 ntBASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms