Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.28■□□□□ 0.36
Rfc4Q99J62 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Gm28630-201ENSMUST00000187806 498 ntBASIC17.28■□□□□ 0.36
Rfc4Q99J62 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.28■□□□□ 0.36
Rfc4Q99J62 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.28■□□□□ 0.36
Rfc4Q99J62 Gm7730-201ENSMUST00000212486 454 ntBASIC17.28■□□□□ 0.36
Rfc4Q99J62 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfc4Q99J62 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Gm14767-201ENSMUST00000121559 586 ntBASIC17.27■□□□□ 0.36
Rfc4Q99J62 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rfc4Q99J62 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfc4Q99J62 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rfc4Q99J62 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.27■□□□□ 0.35
Rfc4Q99J62 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfc4Q99J62 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfc4Q99J62 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfc4Q99J62 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.26■□□□□ 0.35
Rfc4Q99J62 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gm18766-201ENSMUST00000189811 808 ntBASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.26■□□□□ 0.35
Rfc4Q99J62 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.26■□□□□ 0.35
Rfc4Q99J62 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc4Q99J62 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms