Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha2Q91Y17 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Gm11025-201ENSMUST00000140773 466 ntBASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha2Q91Y17 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha2Q91Y17 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms