Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Gm14722-201ENSMUST00000118943 689 ntBASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Gm8655-201ENSMUST00000221159 852 ntBASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhac1Q91Y10 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhac1Q91Y10 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhac1Q91Y10 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Gm19164-201ENSMUST00000210667 640 ntBASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhac1Q91Y10 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhac1Q91Y10 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms