Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb22Q91XZ8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Gm10175-201ENSMUST00000086013 645 ntBASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb22Q91XZ8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Gm16026-204ENSMUST00000162652 683 ntBASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb22Q91XZ8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Pcdhb22Q91XZ8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms