Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb4Q91XZ6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb4Q91XZ6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb4Q91XZ6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Pcdhb4Q91XZ6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb4Q91XZ6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb4Q91XZ6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb4Q91XZ6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms