Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usb1Q91W78 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usb1Q91W78 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.88□□□□□ -0.03
Usb1Q91W78 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usb1Q91W78 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usb1Q91W78 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usb1Q91W78 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Usb1Q91W78 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.87□□□□□ -0.03
Usb1Q91W78 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Usb1Q91W78 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.87□□□□□ -0.03
Usb1Q91W78 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.87□□□□□ -0.03
Usb1Q91W78 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.87□□□□□ -0.03
Usb1Q91W78 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.87□□□□□ -0.03
Usb1Q91W78 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Usb1Q91W78 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Usb1Q91W78 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usb1Q91W78 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.86□□□□□ -0.03
Usb1Q91W78 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Usb1Q91W78 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Gm15467-201ENSMUST00000120582 445 ntBASIC14.86□□□□□ -0.03
Usb1Q91W78 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Gm5682-201ENSMUST00000173402 505 ntBASIC14.86□□□□□ -0.03
Usb1Q91W78 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.86□□□□□ -0.03
Usb1Q91W78 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Usb1Q91W78 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usb1Q91W78 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Gm9727-201ENSMUST00000161387 555 ntBASIC14.85□□□□□ -0.03
Usb1Q91W78 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Gm8318-201ENSMUST00000182954 872 ntBASIC14.85□□□□□ -0.03
Usb1Q91W78 Gm37935-201ENSMUST00000192012 982 ntBASIC14.85□□□□□ -0.03
Usb1Q91W78 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.85□□□□□ -0.03
Usb1Q91W78 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.85□□□□□ -0.03
Usb1Q91W78 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usb1Q91W78 Rubie-203ENSMUST00000227803 2430 ntBASIC14.85□□□□□ -0.03
Usb1Q91W78 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms