Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.61■□□□□ 0.41
StrcQ8VIM6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Gm24196-201ENSMUST00000179161 110 ntBASIC17.61■□□□□ 0.41
StrcQ8VIM6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.61■□□□□ 0.41
StrcQ8VIM6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
StrcQ8VIM6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.6■□□□□ 0.41
StrcQ8VIM6 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.6■□□□□ 0.41
StrcQ8VIM6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
StrcQ8VIM6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
StrcQ8VIM6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Gm43179-201ENSMUST00000198797 275 ntBASIC17.59■□□□□ 0.41
StrcQ8VIM6 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.59■□□□□ 0.41
StrcQ8VIM6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.59■□□□□ 0.41
StrcQ8VIM6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
StrcQ8VIM6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.58■□□□□ 0.41
StrcQ8VIM6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
StrcQ8VIM6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.58■□□□□ 0.41
StrcQ8VIM6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.58■□□□□ 0.41
StrcQ8VIM6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.58■□□□□ 0.41
StrcQ8VIM6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.58■□□□□ 0.41
StrcQ8VIM6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
StrcQ8VIM6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
StrcQ8VIM6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.58■□□□□ 0.4
StrcQ8VIM6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
StrcQ8VIM6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
StrcQ8VIM6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
StrcQ8VIM6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.57■□□□□ 0.4
StrcQ8VIM6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
StrcQ8VIM6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.57■□□□□ 0.4
StrcQ8VIM6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
StrcQ8VIM6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.57■□□□□ 0.4
StrcQ8VIM6 Gm27731-201ENSMUST00000185192 107 ntBASIC17.57■□□□□ 0.4
StrcQ8VIM6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.57■□□□□ 0.4
StrcQ8VIM6 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.57■□□□□ 0.4
StrcQ8VIM6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
StrcQ8VIM6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
StrcQ8VIM6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms