Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.08■□□□□ 0.01
Vps39Q8R5L3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Gm13418-201ENSMUST00000119097 944 ntBASIC15.08■□□□□ 0
Vps39Q8R5L3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.08■□□□□ 0
Vps39Q8R5L3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.08■□□□□ 0
Vps39Q8R5L3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.08■□□□□ 0
Vps39Q8R5L3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Vps39Q8R5L3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps39Q8R5L3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.07■□□□□ 0
Vps39Q8R5L3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Gm10499-201ENSMUST00000174094 934 ntBASIC15.07■□□□□ 0
Vps39Q8R5L3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.07■□□□□ 0
Vps39Q8R5L3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.07■□□□□ 0
Vps39Q8R5L3 Birc2-201ENSMUST00000054878 378 ntBASIC15.07■□□□□ 0
Vps39Q8R5L3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps39Q8R5L3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.06■□□□□ 0
Vps39Q8R5L3 Efs-202ENSMUST00000227037 2540 ntBASIC15.06■□□□□ 0
Vps39Q8R5L3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.06■□□□□ 0
Vps39Q8R5L3 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.06■□□□□ 0
Vps39Q8R5L3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.06■□□□□ 0
Vps39Q8R5L3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Vps39Q8R5L3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.06■□□□□ 0
Vps39Q8R5L3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps39Q8R5L3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Vps39Q8R5L3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps39Q8R5L3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps39Q8R5L3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Vps39Q8R5L3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps39Q8R5L3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps39Q8R5L3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps39Q8R5L3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm9103-201ENSMUST00000119371 405 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44357-201ENSMUST00000195897 142 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm19658-201ENSMUST00000196231 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44367-201ENSMUST00000196836 138 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms