Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Camk2g-217ENSMUST00000226630 1937 ntBASIC18■□□□□ 0.47
Top1mtQ8R4U6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Top1mtQ8R4U6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Top1mtQ8R4U6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.97■□□□□ 0.47
Top1mtQ8R4U6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Top1mtQ8R4U6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Top1mtQ8R4U6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms