Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Gm5587-201ENSMUST00000206270 674 ntBASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Gm6433-201ENSMUST00000118634 875 ntBASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Gm8344-201ENSMUST00000119813 856 ntBASIC12.28□□□□□ -0.44
Nup35Q8R4R6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup35Q8R4R6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup35Q8R4R6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Gm15794-201ENSMUST00000120182 631 ntBASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Gm11950-201ENSMUST00000121615 838 ntBASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Gm6345-202ENSMUST00000180900 204 ntBASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms