Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Gm23547-201ENSMUST00000158210 271 ntBASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Mir7684-201ENSMUST00000183858 60 ntBASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp7Q8R1T1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp7Q8R1T1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Gm14767-201ENSMUST00000121559 586 ntBASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Dancr-204ENSMUST00000132389 2347 ntBASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.15■□□□□ 0.66
Chmp7Q8R1T1 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.14■□□□□ 0.66
Chmp7Q8R1T1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Chmp7Q8R1T1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chmp7Q8R1T1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms