Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nudcd3Q8R1N4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.05■□□□□ 0
Nudcd3Q8R1N4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nudcd3Q8R1N4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Rprl3-201ENSMUST00000157400 290 ntBASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Gm44454-201ENSMUST00000198541 138 ntBASIC15.04■□□□□ -0
Nudcd3Q8R1N4 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nudcd3Q8R1N4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms