Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gm27494-201ENSMUST00000184735 189 ntBASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rpp40Q8R1F9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpp40Q8R1F9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Gm11745-201ENSMUST00000121669 448 ntBASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Chchd1-203ENSMUST00000224633 557 ntBASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpp40Q8R1F9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms