Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.75■□□□□ 0.43
Atf7Q8R0S1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf7Q8R0S1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Mzt1-203ENSMUST00000227948 952 ntBASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Atf7Q8R0S1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf7Q8R0S1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf7Q8R0S1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Gm7461-201ENSMUST00000058918 827 ntBASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms