Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Gm14722-201ENSMUST00000118943 689 ntBASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Grk6-207ENSMUST00000225925 2769 ntBASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Mir1668-201ENSMUST00000184114 107 ntBASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf4Q8K4J2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf4Q8K4J2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf4Q8K4J2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.71□□□□□ -0.22
Ebf4Q8K4J2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf4Q8K4J2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Mir5122-201ENSMUST00000175004 89 ntBASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Gm37722-201ENSMUST00000193757 208 ntBASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms