Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Gm43125-201ENSMUST00000201724 730 ntBASIC16.34■□□□□ 0.21
Trim68Q8K243 Gm20553-201ENSMUST00000204205 844 ntBASIC16.34■□□□□ 0.21
Trim68Q8K243 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trim68Q8K243 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim68Q8K243 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim68Q8K243 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim68Q8K243 Asic1-205ENSMUST00000228185 1818 ntBASIC16.33■□□□□ 0.21
Trim68Q8K243 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim68Q8K243 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Trim68Q8K243 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim68Q8K243 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Rprl2-201ENSMUST00000157150 290 ntBASIC16.33■□□□□ 0.2
Trim68Q8K243 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim68Q8K243 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Trim68Q8K243 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim68Q8K243 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trim68Q8K243 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim68Q8K243 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim68Q8K243 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim68Q8K243 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim68Q8K243 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
Trim68Q8K243 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim68Q8K243 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim68Q8K243 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.32■□□□□ 0.2
Trim68Q8K243 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim68Q8K243 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.32■□□□□ 0.2
Trim68Q8K243 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim68Q8K243 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim68Q8K243 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim68Q8K243 Mir449b-201ENSMUST00000104833 80 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 Gm12428-201ENSMUST00000119844 727 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim68Q8K243 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 Thap2-203ENSMUST00000218989 527 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim68Q8K243 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms