Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Psmb5-202ENSMUST00000227257 622 ntBASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfwd3Q8CIK8 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfwd3Q8CIK8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rfwd3Q8CIK8 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.15□□□□□ -0.15
Rfwd3Q8CIK8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms