Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Gm37917-201ENSMUST00000194711 392 ntBASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zswim3Q8CFL8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zswim3Q8CFL8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Mir1897-201ENSMUST00000122581 272 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 AY702102-202ENSMUST00000194651 1173 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Gm46209-201ENSMUST00000217912 553 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zswim3Q8CFL8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Zswim3Q8CFL8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.39■□□□□ 0.21
Zswim3Q8CFL8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms