Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Efs-202ENSMUST00000227037 2540 ntBASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup88Q8CEC0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Nup88Q8CEC0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Gm10175-201ENSMUST00000086013 645 ntBASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.74■□□□□ 0.43
Nup88Q8CEC0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm23935-201ENSMUST00000102303 57 ntBASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm24270-201ENSMUST00000102326 57 ntBASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm24245-201ENSMUST00000157318 57 ntBASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms