Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm37153-201ENSMUST00000193637 231 ntBASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc38Q8CDN8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Gm9682-201ENSMUST00000197505 556 ntBASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Rps4l-201ENSMUST00000071745 943 ntBASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc38Q8CDN8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Gm24589-201ENSMUST00000116692 94 ntBASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc38Q8CDN8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc38Q8CDN8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc38Q8CDN8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc38Q8CDN8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms