Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Gm14722-201ENSMUST00000118943 689 ntBASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Gm5682-201ENSMUST00000173402 505 ntBASIC17.5■□□□□ 0.39
Vps53Q8CCB4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Gm19164-201ENSMUST00000210667 640 ntBASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps53Q8CCB4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Chchd1-203ENSMUST00000224633 557 ntBASIC17.49■□□□□ 0.39
Vps53Q8CCB4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.49■□□□□ 0.39
Vps53Q8CCB4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms