Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Gm9794-201ENSMUST00000202370 423 ntBASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Gm44855-201ENSMUST00000205725 362 ntBASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Gm18187-201ENSMUST00000196476 984 ntBASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptcd1Q8C2E4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptcd1Q8C2E4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ptcd1Q8C2E4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Gm25144-201ENSMUST00000179561 110 ntBASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Gm25352-201ENSMUST00000179815 110 ntBASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptcd1Q8C2E4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms