Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.1□□□□□ -0.15
Vps9d1Q8C190 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps9d1Q8C190 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gm15165-201ENSMUST00000118140 502 ntBASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gm15372-201ENSMUST00000120729 834 ntBASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps9d1Q8C190 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vps9d1Q8C190 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps9d1Q8C190 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps9d1Q8C190 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Gm12895-201ENSMUST00000122214 226 ntBASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Birc2-201ENSMUST00000054878 378 ntBASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps9d1Q8C190 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms