Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Celf4-206ENSMUST00000224553 1729 ntBASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Gm12350-201ENSMUST00000121208 462 ntBASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Gm2651-201ENSMUST00000203560 838 ntBASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf3Q8C120 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf3Q8C120 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Gm18195-201ENSMUST00000207604 706 ntBASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms