Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Mir8117-201ENSMUST00000184773 107 ntBASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Gm15467-201ENSMUST00000120582 445 ntBASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Gm43514-201ENSMUST00000198852 424 ntBASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek11Q8C0Q4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm10154-201ENSMUST00000084445 354 ntBASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek11Q8C0Q4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Gm14494-201ENSMUST00000118786 435 ntBASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Mir3113-201ENSMUST00000175478 76 ntBASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek11Q8C0Q4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms