Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Celf4-206ENSMUST00000224553 1729 ntBASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Gm18737-201ENSMUST00000173594 937 ntBASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf2Q8BZT2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Gm2810-201ENSMUST00000118681 990 ntBASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Gm43767-201ENSMUST00000198933 381 ntBASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf2Q8BZT2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3rf2Q8BZT2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.02
Sh3rf2Q8BZT2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sh3rf2Q8BZT2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm27430-201ENSMUST00000184585 107 ntBASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm44333-201ENSMUST00000197168 107 ntBASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm5779-201ENSMUST00000218467 910 ntBASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf2Q8BZT2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms