Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chd9Q8BYH8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Gm8805-201ENSMUST00000117848 313 ntBASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd9Q8BYH8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Gm11628-201ENSMUST00000117568 171 ntBASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Chd9Q8BYH8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gm3436-201ENSMUST00000179930 840 ntBASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gm27920-201ENSMUST00000183953 96 ntBASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms